Difference between revisions of "3PCLR"
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| − | [[Category:Software]][[Category:Biology]][[Category: | + | [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|3pclr}} | |{{#vardefine:app|3pclr}} | ||
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<!--Modules--> | <!--Modules--> | ||
| − | == | + | ==Environment Modules== |
| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DOC - documentation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_EXE - example directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 20:35, 11 August 2022
Description
3P-CLR is a method to detect positive selection in a three-population tree using patterns of linked allele frequency differentiation. It can distinguish selective events that occurred in the common ancestral population of the two most closely-related populations from those events that occurred in each of the populations after the split from each other.
Environment Modules
Run module spider 3pclr to find out what environment modules are available for this application.
System Variables
- HPC_3PCLR_DIR - installation directory
- HPC_3PCLR_BIN - executable directory
- HPC_3PCLR_DOC - documentation directory
- HPC_3PCLR_EXE - example directory