Difference between revisions of "NMRPipe"

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[[Category:Software]][[Category:Biochemistry]]
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[[Category:Software]][[Category:Biology]]
 
{|<!--CONFIGURATION: REQUIRED-->
 
{|<!--CONFIGURATION: REQUIRED-->
 
|{{#vardefine:app|NMRPipe}}
 
|{{#vardefine:app|NMRPipe}}
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|{{#vardefine:testing|}} <!--TESTING/PROFILING-->
 
|{{#vardefine:testing|}} <!--TESTING/PROFILING-->
 
|{{#vardefine:faq|}} <!--FAQ-->
 
|{{#vardefine:faq|}} <!--FAQ-->
|{{#vardefine:citation|}} <!--CITATION-->
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|{{#vardefine:citation|1}} <!--CITATION-->
 
|{{#vardefine:installation|}} <!--INSTALLATION-->
 
|{{#vardefine:installation|}} <!--INSTALLATION-->
 
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<!--Modules-->
 
<!--Modules-->
==Required Modules==
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==Environment Modules==
[[Modules|modules documentation]]
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
===Serial===
 
*{{#lowercase:{{#var:app}}}}
 
 
 
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
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* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_BIN - executable directory
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* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
* HPC_{{#uppercase:{{#var:app}}}}_LIB - library directory
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* HPC_{{uc:{{#var:app}}}}_LIB - library directory
  
 
<!--Run-->
 
<!--Run-->
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{{#if: {{#var: citation}}|==Citation==
 
{{#if: {{#var: citation}}|==Citation==
 
If you publish research that uses {{#var:app}} you have to cite it as follows:
 
If you publish research that uses {{#var:app}} you have to cite it as follows:
DOUBLE_CLICK_TO_WRITE_CITATION_HERE
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 +
F. Delaglio, S. Grzesiek, G. W. Vuister, G. Zhu, J. Pfeifer and A. Bax: NMRPipe: a multidimensional spectral processing system based on UNIX pipes, J. Biomol. NMR. 6, 277-293 (1995).
 
|}}
 
|}}
 
<!--Installation-->
 
<!--Installation-->

Latest revision as of 15:55, 23 August 2022

Description

NMRPipe website  

NMRPipe is an extensive software system for processing, analyzing, and exploiting NMR spectroscopic data. An NMRPipe installation also provides the applications NMRDraw, NMRWish, TALOS+, SPARTA+, DYNAMO, DC, MFR, ACME, and others.

Environment Modules

Run module spider NMRPipe to find out what environment modules are available for this application.

System Variables

  • HPC_NMRPIPE_DIR - installation directory
  • HPC_NMRPIPE_BIN - executable directory
  • HPC_NMRPIPE_LIB - library directory




Citation

If you publish research that uses NMRPipe you have to cite it as follows:

F. Delaglio, S. Grzesiek, G. W. Vuister, G. Zhu, J. Pfeifer and A. Bax: NMRPipe: a multidimensional spectral processing system based on UNIX pipes, J. Biomol. NMR. 6, 277-293 (1995).